Information for 2-SRATKWACWWKMAATT (Motif 2)

A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A C T G G T A C C G T A C G T A A C T G A C G T C G T A G T C A C T G A A C G T A G C T A T C G
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.807
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 19.3bp
Average Position of motif in Background23.2 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0005.1_Barhl1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:SRATKWACWWKMAATT-----
-----AACAACCAATTAATTC
 A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:SRATKWACWWKMAATT-----
-----AAAAACCAATTAAGAA
 A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Hmx3/MA0898.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:SRATKWACWWKMAATT-------
------ACAAGCAATTAAAGAAT
 A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:SRATKWACWWKMAATT-------
------ACAAGCAATTAAAGAAT
 A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

Hmx2/MA0897.1/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:SRATKWACWWKMAATT-------
------ACAAGCAATTAAAGAAT
 A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:SRATKWACWWKMAATT-------
------ACAAGCAATTAAAGAAT
 A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Msx3/MA0709.1/Jaspar

Match Rank:7
Score:0.55
Offset:10
Orientation:forward strand
Alignment:SRATKWACWWKMAATT--
----------CCAATTAA
 A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

PH0008.1_Barx2/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:SRATKWACWWKMAATT-----
-----NANAANTAATTANTTA
 A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T G A G A C T G T C A T C G A A G T C G A C T G T C A G C T A C A G T C A G T C T G A T G A C A G C T C G A T C G T A

Dlx2/MA0885.1/Jaspar

Match Rank:9
Score:0.54
Offset:10
Orientation:forward strand
Alignment:SRATKWACWWKMAATT--
----------GCAATTAA
 A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A

PH0106.1_Msx1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:SRATKWACWWKMAATT-----
-----TGCAACTAATTAATTC
 A T G C T C G A C G T A A G C T A C G T C G A T G T C A A G T C C G A T C G A T A C T G T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C G C T A C T G A G A T C G A C T G T C A C G T A C G A T C G A T C T G A C T G A A C G T G C A T G T A C