Information for 11-TGACCTHGCSANC (Motif 19)

A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C
Reverse Opposite:
C T A G T A C G C G A T A T G C T A C G G T A C C A T G T G C A T A C G A T C G C A G T A G T C T G C A
p-value:1e-2
log p-value:-5.662e+00
Information Content per bp:1.446
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif16.71%
Number of Background Sequences with motif6025.2
Percentage of Background Sequences with motif12.11%
Average Position of motif in Targets47.6 +/- 24.7bp
Average Position of motif in Background49.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCTHGCSANC
TGACCTYA-----
 A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGACCTHGCSANC
TGACCT-------
 A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGACCTHGCSANC
TGACCYCT-----
 A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGACCTHGCSANC--
TGACCTTTTGACCTC
 A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGACCTHGCSANC
NTGACCTTGA----
 A C G T A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGACCTHGCSANC
--AGCGCGCC---
 A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTHGCSANC
GTGACCTT------
 A C G T A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTHGCSANC--
TTGACCTTTTGACCTT
 A C G T A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGACCTHGCSANC
TGACCTTTNCNT-
 A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTHGCSANC
BNTGDCCTTG-----
 A C G T A C G T A C G T T C A G G C T A T A G C A T G C A C G T G T A C C A T G A G T C T A C G G C T A A G T C G A T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T