Information for 9-GGGAAGAAGGGGGTGC (Motif 18)

A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A G T C A G T C A G T C A G T C A C G T A G C T A G T C A G C T A C G T G T A C A G T C A G T C
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.923
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 15.0bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGAAGAAGGGGGTGC
GGGGCCCAAGGGGG---
 A C G T A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGGAAGAAGGGGGTGC
NNNNGGGGGAAGANGG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGGAAGAAGGGGGTGC-----
----GCTGGGGGGTACCCCTT
 A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGGAAGAAGGGGGTGC----
---NNNAAGGGGGCGGGNNN
 A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGGAAGAAGGGGGTGC
-----GGAGGGGGAA-
 A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGAAGAAGGGGGTGC
--GGAGAAAGGTGCGA
 A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C
A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAGAAGGGGGTGC-
NNNGGGHAGCAHRTGCTRCC
 A C G T A C G T A C G T A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C A C G T
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

Klf12/MA0742.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGGAAGAAGGGGGTGC--
---NANAAGGGCGTGGTC
 A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGGAAGAAGGGGGTGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGGAAGAAGGGGGTGC-----
-GCCASCAGGGGGCGCYVNNG
 A C T G A C T G A C T G G T C A C T G A A C T G C T G A C G T A A C T G A C T G A C T G A C T G C T A G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G