Information for 6-CAGGTGATAC (Motif 14)

A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A A C G T A G T C G C T A A G T C A G T C A C G T T C A G
p-value:1e-5
log p-value:-1.353e+01
Information Content per bp:1.880
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif158.7
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets52.7 +/- 23.3bp
Average Position of motif in Background47.5 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0162.1_Six2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGATAC------
ANANGTGATACCCCATT
 A C G T A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAGGTGATAC
-AGGTGTCA-
 A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGATAC------
ANANNTGATACCCNATN
 A C G T A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGATAC
AACAGGTGNT--
 A C G T A C G T A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGATAC------
ANANGTGATACCCTATN
 A C G T A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGATAC------
ANANGTGATACCCTATN
 A C G T A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGATAC
NNCAGGTGNN--
 A C G T A C G T A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAGGTGATAC-
-AGGTGTTAAT
 A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C A C G T
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

PH0165.1_Six6_1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGATAC------
ANANNTGATACCCTATN
 A C G T A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

DMRT3/MA0610.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAGGTGATAC---
--NTTGATACATT
 A G T C C G T A A C T G A C T G C G A T A C T G C G T A A C G T C T G A A G T C A C G T A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T