Information for 4-AATYATGYCTWSA (Motif 6)

C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G C G A T C G T A A C T G C T G A A G T C G T C A A C G T C T A G C G T A A C G T A C G T
p-value:1e-9
log p-value:-2.275e+01
Information Content per bp:1.879
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.8 +/- 14.4bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AATYATGYCTWSA
NNCTNAATTATGANN---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATYATGYCTWSA
TGAATTATGCAT---
 A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AATYATGYCTWSA--
-----TGTCTAGACG
 C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATYATGYCTWSA
AATTATT------
 C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AATYATGYCTWSA
NNNGGTAATTATNGNGN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATYATGYCTWSA
GCAATTAA-------
 A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A
T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATYATGYCTWSA
CCAATTAC-------
 A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AATYATGYCTWSA
CCTAATTATC------
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATYATGYCTWSA
CCAATTAC-------
 A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATYATGYCTWSA
CCAATTAA-------
 A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C T G A G C T A G T C A C G T C G T A A T G C C G T A
A G T C G A T C T C G A T G C A G A C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T