Information for 1-CTGGGDACHTGCCAGG (Motif 3)

A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T C G A T C G G T A C C G T A C A T G A C T G C G A T G A C T A G T C A G T C G T A C C T G A A C T G
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.762
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.6 +/- 17.1bp
Average Position of motif in Background39.5 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGGGDACHTGCCAGG
TTGGCANNNTGCCAAG
 A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGGGDACHTGCCAGG
-TGGCAGNCTGCCAG-
 A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.59
Offset:8
Orientation:forward strand
Alignment:CTGGGDACHTGCCAGG
--------TTGCCAAG
 A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTGGGDACHTGCCAGG
------RCATTCCWGG
 A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGGGDACHTGCCAGG-
--TGACANARRCCAGRC
 A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G A C G T
A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGGGDACHTGCCAGG
TTGGCATGGTGCCA--
 A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTGGGDACHTGCCAGG
WDNCTGGGCA---------
 A C G T A C G T A C G T A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CTGGGDACHTGCCAGG---
-----NGCTTTCTAGGAAN
 A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CTGGGDACHTGCCAGG
--------TTGACAGC
 A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CTGGGDACHTGCCAGG---
----NNNCTTTCCAGGAAA
 A G T C A G C T A C T G A C T G C T A G C G T A G C T A G T A C G A T C A C G T A C T G A T G C A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A