Information for 1-AAGTCTGGAGGSM (Motif 1)

C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A
Reverse Opposite:
C A G T A T G C G T A C A G T C G A C T A G T C G T A C C G T A A C T G C T G A A G T C A G C T A C G T
p-value:1e-14
log p-value:-3.386e+01
Information Content per bp:1.755
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif31.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets68.4 +/- 20.4bp
Average Position of motif in Background51.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGTCTGGAGGSM
-GGTCACGTGG--
 C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A
A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGTCTGGAGGSM
-TGTCAGGGGGCG
 C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAGTCTGGAGGSM
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGTCTGGAGGSM
CAAAGGTCAAGGG---
 A C G T A C G T A C G T C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAGTCTGGAGGSM
-TGCCCNGGGGCA
 C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGTCTGGAGGSM
CTGTCTGG-----
 C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGTCTGGAGGSM
VBSYGTCTGG-----
 A C G T A C G T C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGTCTGGAGGSM
-GGTCTGGCAT--
 C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGTCTGGAGGSM--
ATTTTNGGGGGGCNN
 C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A A C G T A C G T
T C G A C A G T G C A T C G A T C G A T C G A T C A T G C T A G A C T G A C T G A C T G A T C G A G T C G A C T G A C T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGTCTGGAGGSM-
GAGGTCAAAAGGTCA
 A C G T C G T A T C G A T A C G A G C T A G T C G C A T A C T G A C T G C G T A A C T G A C T G A T C G G T C A A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A