| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -9.164e+00 | 0.0381 | 39.0 | 8.37% | 2145.3 | 4.37% | motif file (matrix) |
svg |
| 2 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -5.829e+00 | 0.5352 | 63.0 | 13.52% | 4660.1 | 9.49% | motif file (matrix) |
svg |
| 3 |
| ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.448e+00 | 0.5352 | 4.0 | 0.86% | 68.4 | 0.14% | motif file (matrix) |
svg |
| 4 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -4.900e+00 | 0.6776 | 28.0 | 6.01% | 1786.7 | 3.64% | motif file (matrix) |
svg |
