Information for 13-TTCCCARAAMACA (Motif 15)

A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A
Reverse Opposite:
A C G T A C T G C G A T A C G T A G C T C G A T G A C T C A G T C A T G C T A G C T A G T C G A G T C A
p-value:1e-11
log p-value:-2.646e+01
Information Content per bp:1.655
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.61%
Number of Background Sequences with motif574.5
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets45.2 +/- 23.6bp
Average Position of motif in Background49.3 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCARAAMACA
TTTCCCAGAAN---
 A C G T A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTCCCARAAMACA
ATTTCCAAGAA----
 A C G T A C G T A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCARAAMACA
TTTCCTGGAAA---
 A C G T A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTCCCARAAMACA
NNNTTTCCTGGAAA---
 A C G T A C G T A C G T A C G T A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTCCCARAAMACA
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTCCCARAAMACA
NTTTCTNAGAAA---
 A C G T A C G T A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTCCCARAAMACA
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTCCCARAAMACA
ATTTCCNGGAAATN-
 A C G T A C G T A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTCCCARAAMACA---
TACCCACAATGCATTG
 A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTCCCARAAMACA
HTTTCCCASG-----
 A C G T A C G T A C G T A G C T G A T C A G T C G T A C G T C A C T G A G C T A C T G A T G C A G C T A G T A C G T C A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T