Information for 8-ATAGGAGAGC (Motif 40)

C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C G T A T G C A G T C A C G T C G T A A C G T
p-value:1e-6
log p-value:-1.538e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.0 +/- 27.8bp
Average Position of motif in Background60.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATAGGAGAGC--
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ATAGGAGAGC-
------CAGCC
 C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATAGGAGAGC
----CGGAGC
 C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

PB0106.1_Arid5a_2/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ATAGGAGAGC-
CATACAATACGAAATAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ATAGGAGAGC--
--TTGAGTGSTT
 C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ATAGGAGAGC-
GRTGMTRGAGCC
 A C G T C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------ATAGGAGAGC
CCAAAAATAG------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:ATAGGAGAGC
-CAGGTGAGG
 C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-ATAGGAGAGC----
CAAAGGCGTGGCCAG
 A C G T C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:ATAGGAGAGC-
-CTYRAGTGSY
 C G T A A C G T C G T A A C T G A T C G C G T A A C T G C G T A A C T G A G T C A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C