Information for 7-TAAACYWCTG (Motif 36)

A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
Reverse Opposite:
A G T C C G T A T C A G C G A T C T G A C T A G C G A T A C G T A C G T G T C A
p-value:1e-7
log p-value:-1.757e+01
Information Content per bp:1.709
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif567.0
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets53.3 +/- 25.6bp
Average Position of motif in Background49.3 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TAAACYWCTG
CTAATCCTCTT
 A C G T A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAAACYWCTG
NYTAATCCYB--
 A C G T A C G T A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAAACYWCTG
YTAATCCY---
 A C G T A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAAACYWCTG
TAATCCCN--
 A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAAACYWCTG
TTAATCCC---
 A C G T A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAAACYWCTG
TTAATCCT---
 A C G T A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAAACYWCTG
CTTAATCCC---
 A C G T A C G T A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAAACYWCTG
GCTAATCC----
 A C G T A C G T A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAAACYWCTG
GCTAATCCCC--
 A C G T A C G T A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAAACYWCTG
CCTAATCCGC--
 A C G T A C G T A C G T C G T A G T C A C G T A A G T C A G C T G C T A A G T C A C G T T C A G
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T