Information for 19-GTCCAGGCGCACANTT (Motif 25)

C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T
Reverse Opposite:
T C G A C G T A A G T C A C G T A T C G A C G T A C T G A G T C C A T G A G T C A G T C C G A T A C T G A C T G T C G A A G T C
p-value:1e-9
log p-value:-2.205e+01
Information Content per bp:1.720
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 26.8bp
Average Position of motif in Background66.8 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTCCAGGCGCACANTT--
--CGAAGCACACAAAATA
 C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCCAGGCGCACANTT
--CCAGGAACAG----
 C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCCAGGCGCACANTT--
--AGCGGCACACACGCAA
 C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAGGCGCACANTT
TGCCAAAATAAACANN-
 A C G T C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTCCAGGCGCACANTT--
-TACATGTGCACATAAAA
 C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T A C G T A C G T
A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTCCAGGCGCACANTT
--VCAGGTRDRY----
 C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T
A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAGGCGCACANTT
TGCCCAGNHW-------
 A C G T C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCCAGGCGCACANTT
NNNVCTGWGYAAACASN-
 A C G T A C G T C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GTCCAGGCGCACANTT----
-----CTCACACAATGGCGC
 C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTCCAGGCGCACANTT----
---NNNNNGAACAATTGANN
 C T A G A C G T A G T C G T A C C G T A A C T G C T A G G T A C T C A G T G A C C G T A A T G C C G T A A C T G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T