Information for 17-ATGTCAATGACATTGC (Motif 22)

C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C
Reverse Opposite:
A C T G G T A C C G T A C G T A C G A T C T A G A C G T G T A C C G T A A C G T A C G T A C T G G T C A G T A C T C G A A C G T
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.5 +/- 23.8bp
Average Position of motif in Background34.8 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ATGTCAATGACATTGC-
--TTGAATGAAATTCGA
 C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGTCAATGACATTGC
AGGTCANTGACCTN--
 C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATGTCAATGACATTGC-
--AACAATAACATTGTT
 C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C A C G T
A C G T A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATGTCAATGACATTGC
AGGTCAAGGTCA----
 C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ATGTCAATGACATTGC
-----NATGACCTTGA
 C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C
A C G T A C G T A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATGTCAATGACATTGC
WATGCAAATGAG-----
 A C G T C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATGTCAATGACATTGC
AGGTCAAGGTCA----
 C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATGTCAATGACATTGC---
--NNNNATGACCTTGANTN
 C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C A C G T A C G T A C G T
A C G T A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATGTCAATGACATTGC
ATGGTTCAATAATTTTG-
 A C G T A C G T C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G A C G T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ATGTCAATGACATTGC-
------ATGACCTTGAA
 C G T A A G C T A C T G A C G T A G T C C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T C A T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A