Information for 11-TGKTTGRTGMRYW (Motif 19)

A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T
Reverse Opposite:
C G T A C T G A A G C T A C G T A G T C C G T A A G T C A G T C C G T A C G T A G T A C A G T C C G T A
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.821
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 24.9bp
Average Position of motif in Background36.0 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGKTTGRTGMRYW
TTTGATTGATGN---
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGKTTGRTGMRYW
TGATTGATGA---
 A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGKTTGRTGMRYW-
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGKTTGRTGMRYW
ATGATKGATGRC--
 A C G T A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGKTTGRTGMRYW
NNANTGATTGATNTTN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGKTTGRTGMRYW
TTGATTGN------
 A C G T A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------TGKTTGRTGMRYW
AGAGTGCTGATTGGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGKTTGRTGMRYW-
CTGATTGGTCNATTT
 A C G T A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGKTTGRTGMRYW
TGATTTATGGC--
 A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGKTTGRTGMRYW
TGATTRATGGCY-
 A C G T A C T G A C T G A C G T A C G T A C T G C T A G A C G T A C T G G T C A T C G A A G C T C G A T
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T