Information for 15-TKCATRTMWWATYCAG (Motif 16)

C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C T G A C G T A A G C T C G T A C G T A A C T G C G T A A G C T G T C A A C G T A C T G G T C A C G T A
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 23.0bp
Average Position of motif in Background49.2 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TKCATRTMWWATYCAG
-TCATGAATWATTCAT
 C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
A C G T G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TKCATRTMWWATYCAG
---ATGCATAATTCA-
 C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
A C G T A C G T A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TKCATRTMWWATYCAG
--CATTAATTATTCAT
 C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
A C G T A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TKCATRTMWWATYCAG
CTCATTAATTATGCAT
 C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

POU4F2/MA0683.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TKCATRTMWWATYCAG
CTCATTAATTATGCAT
 C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TKCATRTMWWATYCAG
-WYATGCATWATGCAT
 C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
A C G T C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TKCATRTMWWATYCAG
AAAATACATGTAATACT---
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TKCATRTMWWATYCAG
AATATACATGTAATATA---
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TKCATRTMWWATYCAG
AATATACATGTAAAATT---
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TKCATRTMWWATYCAG
AAAATACATGTAAAAAT---
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A A C G T T C G A A C G T G T A C C G A T C G A T C T G A A C G T A G C T A G T C C G T A A C T G
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T A C G T A C G T