Information for 13-ATRAARTAAAYMAMST (Motif 15)

C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T
Reverse Opposite:
C G T A A T C G A C G T A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T A C G T A C G T A G T C C G T A A G C T
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.849
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 14.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj3/MA0851.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATRAARTAAAYMAMST-
AAAAAGTAAACAAACAC
 C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATRAARTAAAYMAMST-
AAAAAGTAAACAAACAC
 C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATRAARTAAAYMAMST-
AAAAAGTAAACAAAGAC
 C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PB0019.1_Foxl1_1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATRAARTAAAYMAMST-
TAAATGTAAACAAAGGT
 C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ATRAARTAAAYMAMST
---AAATAAACA----
 C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATRAARTAAAYMAMST
CAAAAGTAAACAAAG-
 C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATRAARTAAAYMAMST
--TAAGTAAACAAA--
 C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T
A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATRAARTAAAYMAMST-
AAAATGTAAACAAACAG
 C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATRAARTAAAYMAMST-
AAAATGTAAACAAACAG
 C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ATRAARTAAAYMAMST--
--AAAGTAAACAAAAATT
 C T G A A C G T C T A G C G T A C G T A C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A G T C A A T G C A C G T A C G T A C G T
A C G T A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T