Information for 9-TGACAGTCACAAAGTC (Motif 9)

C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
Reverse Opposite:
A T C G C G T A A T G C A G C T G A C T A C G T A C T G C G A T A C T G C G T A G T A C A C G T A C T G A C G T A G T C C G T A
p-value:1e-11
log p-value:-2.587e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 25.6bp
Average Position of motif in Background73.2 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGACAGTCACAAAGTC
SCTGTCAVTCAV------
 A C G T A C G T C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGACAGTCACAAAGTC
TTGACAG----------
 A C G T C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGACAGTCACAAAGTC
NCTGTCAATCAN------
 A C G T A C G T C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGACAGTCACAAAGTC
TTGACAGG---------
 A C G T C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGACAGTCACAAAGTC
TTGACAGC---------
 A C G T C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TGACAGTCACAAAGTC
--------ACAAAG--
 C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGACAGTCACAAAGTC
VBTGWCAGCB--------
 A C G T A C G T C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGACAGTCACAAAGTC
AGGTGHCAGACA-------
 A C G T A C G T A C G T C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGACAGTCACAAAGTC
RHTGWCAR----------
 A C G T A C G T C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGACAGTCACAAAGTC
GSCTGTCACTCA-------
 A C G T A C G T A C G T C G A T A C T G C G T A A G T C C G T A A C T G C G A T A G T C C G T A A G T C C G T A C G T A C T G A A T C G C G A T A T G C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T