Information for 6-AGTGTCACATGTGACT (Motif 6)

C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T
Reverse Opposite:
C G T A A C T G A G C T A G T C G T C A A G T C C G T A C G A T A T C G A G C T A T C G C G T A A T G C G T C A A G T C C G A T
p-value:1e-11
log p-value:-2.634e+01
Information Content per bp:1.822
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 15.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGTGTCACATGTGACT
--GGTCACATGAC---
 C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T
A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGTGTCACATGTGACT
---GTCACATGAY---
 C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGTGTCACATGTGACT
--GGTCACGTGGC---
 C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T
A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGTGTCACATGTGACT
---GTCACGTGGT---
 C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T
A C G T A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGTGTCACATGTGACT
---GTCACGTGGM---
 C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGTGTCACATGTGACT
--GGTCACGTGC----
 C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T
A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGTGTCACATGTGACT
--GGTCACGTGG----
 C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T
A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGTGTCACATGTGACT-
NNTTTTACATGTANNNT
 C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGTGTCACATGTGACT-
ANTATTACATGTANNNN
 C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGTGTCACATGTGACT-
ANTNTTACATGTATNTA
 C G T A A C T G C A G T A T C G A C G T A T G C C T G A A T G C C G T A C G A T A C T G A C G T C T A G C T G A A G T C C G A T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A