Information for 2-CTGTCGCCAT (Motif 21)

A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T C T A G A C T G A G T C A C T G C G T A A G T C C G T A A C T G
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.936
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 18.3bp
Average Position of motif in Background40.4 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBED1/MA0749.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCGCCAT--
TATGTCGCGATAG
 A C G T A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T A C G T A C G T
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGTCGCCAT--
-GTCCGCCATTA
 A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T A C G T A C G T
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGTCGCCAT--
CTGTTGCTAGGS
 A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T A C G T A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCGCCAT-
SCTGTCARCACC
 A C G T A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTCGCCAT
GCTGTG-----
 A C G T A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCGCCAT
CCTGTCAA---
 A C G T A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CTGTCGCCAT-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGTCGCCAT----
--GCCGCCATCTTG
 A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCGCCAT---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCGCCAT
GCTGTCAA---
 A C G T A G T C A C G T A C T G A C G T A G T C A C T G G T A C A G T C C G T A A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T