Information for 4-CAAAGCCACA (Motif 7)

G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A
Reverse Opposite:
G A C T A T C G C G A T C A T G T A C G A T G C G A C T C A G T C A G T C T A G
p-value:1e-11
log p-value:-2.626e+01
Information Content per bp:1.687
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif8.83%
Number of Background Sequences with motif1703.9
Percentage of Background Sequences with motif3.50%
Average Position of motif in Targets47.5 +/- 28.4bp
Average Position of motif in Background51.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CAAAGCCACA---
--AAACCACAGAN
 G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CAAAGCCACA--
--AAACCACANN
 G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CAAAGCCACA
TCCAATCCACA
 A C G T G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CAAAGCCACA--
SSAATCCACANN
 G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAAAGCCACA---
-NWAACCACADNN
 G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAAAGCCACA-
-NAAACCACAG
 G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CAAAGCCACA--
--AAACCACAGC
 G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAAGCCACA
AAAAGTCAA-
 G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAAGCCACA
NTCAAGGTCA--
 A C G T A C G T G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAAGCCACA
CAAGGHCANV
 G A T C G T C A G T C A C T G A T A C G A T G C G T A C C G T A T A G C C T G A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G