Information for 4-AACAAAMCYACGC (Motif 5)

C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
Reverse Opposite:
C A T G G T A C C T A G A C G T C T G A C A T G C A G T A C G T A G C T G C A T C A T G A C G T A C G T
p-value:1e-12
log p-value:-2.972e+01
Information Content per bp:1.736
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.9 +/- 20.5bp
Average Position of motif in Background60.2 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------AACAAAMCYACGC
ATATCAAAACAAAACA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AACAAAMCYACGC
AACAAT-------
 C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AACAAAMCYACGC
AAACAAACATTC--
 A C G T C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AACAAAMCYACGC
GTTAAAAAAAAAAATTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AACAAAMCYACGC
GTTCAAAAAAAAAATTC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AACAAAMCYACGC
AAAGTAAACAAAAATT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AACAAAMCYACGC
AAAAATAACAAACGG----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AACAAAMCYACGC
AGAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------AACAAAMCYACGC
CAAAAGTAAACAAAG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACAAAMCYACGC
NANANAC------
 C G T A C G T A G T A C C G T A T C G A C G T A G T C A G T A C G A C T G T C A A G T C C A T G G T A C
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T