Information for 6-CTGGSMTGCCACAGGS (Motif 5)

A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G
Reverse Opposite:
T A G C A G T C A G T C A C G T A T C G A C G T A T C G C T A G A G T C C G T A A C G T A T C G G A T C T G A C C G T A C T A G
p-value:1e-13
log p-value:-3.023e+01
Information Content per bp:1.748
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.1 +/- 25.6bp
Average Position of motif in Background41.5 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CTGGSMTGCCACAGGS--
-----ATGCAACAGGTGG
 A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CTGGSMTGCCACAGGS----
-----GAGCAACAGGTGGTT
 A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CTGGSMTGCCACAGGS-
------AGCCTCAGGCA
 A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:CTGGSMTGCCACAGGS
---------CACAGN-
 A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CTGGSMTGCCACAGGS-
------AGCCTCAGGCA
 A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CTGGSMTGCCACAGGS-
------CGCCTCAGGCA
 A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CTGGSMTGCCACAGGS---
-------GCCTCAGGGCAT
 A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTGGSMTGCCACAGGS---
----ANTGCCTGAGGCAAN
 A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTGGSMTGCCACAGGS---
----NTNGCCTCAGGCNNN
 A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CTGGSMTGCCACAGGS---
-------SCCTSAGGSCAW
 A G T C A C G T A C T G C A T G T A G C T G C A C G A T A C T G A G T C A T G C C G T A A T G C C G T A A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T