Information for 11-GCAGCCCCAGAGA (Motif 21)

A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T A G T C A C G T A C T G A C T G C T A G A C T G A G T C A C G T A T C G A G T C
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.8 +/- 16.9bp
Average Position of motif in Background50.6 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCAGCCCCAGAGA-
--GTCCCCAGGGGA
 A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCAGCCCCAGAGA--
---TCCCNNGGGACN
 A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCAGCCCCAGAGA
ATCCCCGCCCCTAAAA
 A C G T A C G T A C G T A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAGCCCCAGAGA-----
-CAAATCCAGACATCACA
 A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCAGCCCCAGAGA
-CGCCCCCTGACA
 A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A
A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAGCCCCAGAGA-------
TCAGCACCATGGACAGCTCC
 A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCCCAGAGA-------
TTCAGCACCATGGACAGCGCC
 A C G T A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCAGCCCCAGAGA
TCACCCCGCCCCAAATT
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCAGCCCCAGAGA
-CAGCC-------
 A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCAGCCCCAGAGA-----
--TGACCCAGTGACCTAC
 A C T G A T G C C G T A A C T G G T A C A G T C A G T C A G T C C G T A C T A G C T G A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C