Information for 9-CACCGGKGGCYCT (Motif 16)

A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G C T A G A C T G A G T C A G T C G T A C G A T C A G T C A C T G A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.291e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.3 +/- 25.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACCGGKGGCYCT
CACAGCGGGGGGTC-
 A C G T A C G T A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CACCGGKGGCYCT
NCNCAGCGGGGGGTC-
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACCGGKGGCYCT
NCGCAGCGGGGGGTC-
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACCGGKGGCYCT
ANCCACCTGTTGCNC-
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACCGGKGGCYCT
CCACCTGTTGCAT-
 A C G T A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CACCGGKGGCYCT
NCCCCCCCGGGGGGN--
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CACCGGKGGCYCT
ACCCCCCCGGGGGGN--
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CACCGGKGGCYCT
NNTNCGCACCTGTNGAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CACCGGKGGCYCT
CCCCCCCGGGGGNN--
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACCGGKGGCYCT
ATTGCCTCAGGCAAT
 A C G T A C G T A G T C C G T A A G T C A G T C A C T G C A T G A C T G A C T G A C T G A G T C A G T C A G T C C G A T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T