Information for 7-AGATTTGTCTCAG (Motif 6)

G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G
Reverse Opposite:
A G T C G C A T T A C G C T G A T A C G G T C A T G A C G T C A T G C A G T C A C A G T T A G C C G A T
p-value:1e-17
log p-value:-3.968e+01
Information Content per bp:1.687
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.4 +/- 23.3bp
Average Position of motif in Background75.0 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGATTTGTCTCAG-
ANTCCTTTGTCTNNNN
 A C G T A C G T G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGATTTGTCTCAG
-CCTTTGTTTT--
 G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGATTTGTCTCAG
NNNCCATTGTGTNAN
 A C G T A C G T G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AGATTTGTCTCAG--
-----TGACTCAGCA
 G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGATTTGTCTCAG
-CCATTGTTNY--
 G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGATTTGTCTCAG
-CCWTTGTYYB--
 G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGATTTGTCTCAG
----TWGTCTGV-
 G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGATTTGTCTCAG
-CCATTGTTTT--
 G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGATTTGTCTCAG
--CTTTGT-----
 G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGATTTGTCTCAG--
-----TGAGTCAGCA
 G C T A A T C G G T C A C A G T A C G T A C G T A C T G A C G T A T G C A G C T A T G C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A