Information for 7-TGTGGCAATG (Motif 3)

A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C T G A G T C A G T C G C T A G T A C G T C A
p-value:1e-23
log p-value:-5.484e+01
Information Content per bp:1.860
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 26.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGTGGCAATG
NATGTTGCAA--
 A C G T A C G T A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGCAATG
NATTGTGCAAT-
 A C G T A C G T A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTGGCAATG
CTTGGCAA--
 A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGCAATG
NNTTGGCANN-
 A C G T A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGTGGCAATG--
---GACAATGNN
 A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTGGCAATG
NTTGGCANN-
 A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTGGCAATG
TTATGCAAT-
 A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTGGCAATG
-TTGGCA---
 A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGGCAATG
NATGGAAAAN
 A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

ATF4/MA0833.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTGGCAATG
GGATGATGCAATA
 A C G T A C G T A C G T A C G T C A T G C A G T C T A G A C T G T G A C C G T A C G T A A C G T A C T G
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A