Information for 12-AMACTCWACTAAA (Motif 13)

C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A
Reverse Opposite:
A G C T C G A T A C G T C T G A C T A G C A G T C G A T A T C G C G T A A T C G A C G T A C G T A C G T
p-value:1e-11
log p-value:-2.756e+01
Information Content per bp:1.786
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 31.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AMACTCWACTAAA
GCAAAACATTACTA--
 A C G T A C G T A C G T C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AMACTCWACTAAA
AAAAGTCAA-----
 A C G T C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AMACTCWACTAAA
MRSCACTYAA-----
 A C G T A C G T C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AMACTCWACTAAA
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AMACTCWACTAAA
-TAATCAATTA--
 C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AMACTCWACTAAA--
AAAAACCAATTAAGAA
 A C G T C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AMACTCWACTAAA
AASCACTCAA-----
 A C G T A C G T C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AMACTCWACTAAA
AGCCACTCAAG----
 A C G T A C G T C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AMACTCWACTAAA
RSCACTYRAG----
 A C G T C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AMACTCWACTAAA
NSCACTYVAV----
 A C G T C G T A G T C A C G T A A T G C A C G T A T G C C G T A G C T A A G T C A G C T C G T A G C T A C T G A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T