Information for 2-GGCTACCAGAGCC (Motif 4)

A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G A G T C A T G C
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.876
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif118.9
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets56.4 +/- 27.9bp
Average Position of motif in Background50.0 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCTACCAGAGCC
ACATGCTACCTAATAC
 A C G T A C G T A C G T A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCTACCAGAGCC
-GRTGMTRGAGCC
 A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGCTACCAGAGCC
--ATGCCAGACN-
 A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGCTACCAGAGCC
ACTTGCTACCTACACC
 A C G T A C G T A C G T A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCTACCAGAGCC--
NNNNTGCCAGTGATTG
 A C G T A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGCTACCAGAGCC-
NGTTGCCATGGCAA
 A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGCTACCAGAGCC
--TTGCCAAG---
 A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGCTACCAGAGCC
---TGCCAA----
 A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGCTACCAGAGCC
-GCTCCG------
 A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GGCTACCAGAGCC-----
---TGCCTGCGYCMCCTT
 A T C G A C T G A G T C C G A T T C G A A G T C A G T C C G T A A C T G T C G A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T