Information for 6-TTACTCCCCT (Motif 13)

A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T
Reverse Opposite:
C G T A A T C G A C T G A C T G A C T G C G T A A T C G A G C T C G T A C G T A
p-value:1e-5
log p-value:-1.324e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.8 +/- 26.4bp
Average Position of motif in Background48.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0121.1_Obox1/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TTACTCCCCT---
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0129.1_Otx1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTCCCCT--
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0124.1_Obox5_1/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTCCCCT--
NANANTTAATCCCNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0137.1_Pitx1/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTACTCCCCT---
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTACTCCCCT---
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTACTCCCCT---
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTCCCCT--
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTCCCCT--
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TTACTCCCCT
----TCCCCA
 A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTACTCCCCT---
AGGCTAATCCCCAANG
 A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C G T A G T C A G T C A G T C A T G C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G