Information for 3-AACTTATAATTTC (Motif 3)

C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A C G T A C G A T A C G T C G T A C G A T G T C A C G T A A C T G C G A T G A C T
p-value:1e-10
log p-value:-2.365e+01
Information Content per bp:1.824
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.2 +/- 25.5bp
Average Position of motif in Background52.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AACTTATAATTTC
-ACTTTCACTTTC
 C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AACTTATAATTTC
-AGTTTCAGTTTC
 C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AACTTATAATTTC
-RSTTTCRSTTTC
 C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C
A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AACTTATAATTTC-----
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACTTATAATTTC-
TCACTTTCACTTTCN
 A C G T C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AACTTATAATTTC
-AGTTTCAKTTTC
 C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

IRF7/MA0772.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AACTTATAATTTC--
-ANTTTCGCTTTCGN
 C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C A C G T A C G T
A C G T C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AACTTATAATTTC-
TCAGTTTCATTTTCC
 A C G T C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AACTTATAATTTC-----
NTGACTCANTTTTTCCANTN
 A C G T A C G T C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AACTTATAATTTC
-ASTTTCASTTYC
 C T G A C G T A A G T C A C G T A C G T C G T A C G A T G T C A C G T A A C G T C G A T A C G T A G T C
A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C