Information for 7-TTAAAAGTAT (Motif 13)

A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T
Reverse Opposite:
T G C A G C A T T C G A G T A C C G A T A G C T C G A T G A C T G T C A T C G A
p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.655
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif6.94%
Number of Background Sequences with motif1650.6
Percentage of Background Sequences with motif3.42%
Average Position of motif in Targets55.2 +/- 26.8bp
Average Position of motif in Background49.6 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTAAAAGTAT---
NNTATANATATACN
 A C G T A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T A C G T A C G T A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTAAAAGTAT
GNCTATAAAAGG--
 A C G T A C G T A C G T A C G T A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAAAAGTAT
ATTAAA-----
 A C G T A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTAAAAGTAT--
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTAAAAGTAT
CGGTTTCAAA----
 A C G T A C G T A C G T A C G T A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTAAAAGTAT
NNATAAGGNN
 A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTAAAAGTAT
NCYAATAAAA----
 A C G T A C G T A C G T A C G T A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTAAAAGTAT-
TCTAAAAATAGA
 A C G T A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTAAAAGTAT-
DCYAAAAATAGM
 A C G T A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTAAAAGTAT
NATTCAAAT---
 A C G T A C G T A G C T C A G T C T G A G C T A T C G A G C T A C A T G A G C T C G T A A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T