Information for 7-KGGAGTGAGWGGACAA (Motif 8)

C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
Reverse Opposite:
A C G T G A C T T A C G C G A T A T G C G T A C G C T A A G T C A G C T A G T C C G T A G A T C A C G T T G A C G T A C G T C A
p-value:1e-12
log p-value:-2.831e+01
Information Content per bp:1.695
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 29.0bp
Average Position of motif in Background35.1 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----KGGAGTGAGWGGACAA
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C G T C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:KGGAGTGAGWGGACAA
NTGATTGACAGN----
 C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---KGGAGTGAGWGGACAA
ACTATGAATGAATGAT---
 A C G T A C G T A C G T C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:KGGAGTGAGWGGACAA
NNNANTGA--------
 C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:KGGAGTGAGWGGACAA
-TGAGTGACAGSC---
 C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:KGGAGTGAGWGGACAA
----TTGAGTGSTT--
 C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:KGGAGTGAGWGGACAA
-TGCGTGGGYG-----
 C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:KGGAGTGAGWGGACAA
BTGABTGACAGS----
 C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:KGGAGTGAGWGGACAA
---CTTGAGTGGCT--
 C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:KGGAGTGAGWGGACAA
-NGCGTGGGCGGR---
 C A G T A C T G A C T G C G T A C T A G C G A T A C T G C T G A C T A G C G A T C A T G A T C G C G T A A T G C C T G A C G T A
A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T