Information for 3-GATGTATACT (Motif 6)

A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T
Reverse Opposite:
C G T A A C T G G A C T C G T A A C G T C G T A A G T C C G T A C G A T G T A C
p-value:1e-12
log p-value:-2.917e+01
Information Content per bp:1.822
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.99%
Number of Background Sequences with motif141.4
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets41.2 +/- 25.9bp
Average Position of motif in Background51.2 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GATGTATACT-
-ATGAATATTC
 A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T A C G T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GATGTATACT---
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

FOXO3/MA0157.2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GATGTATACT
-TTGTTTAC-
 A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T
A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GATGTATACT
--TGTTTACH
 A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T
A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GATGTATACT--
--TGTTTACTTT
 A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXD1/MA0031.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GATGTATACT
-ATGTTTAC-
 A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T
A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GATGTATACT-
-ATGMATATDC
 A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GATGTATACT--
--TGTTTACTTT
 A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATGTATACT---
TCCATGTTTACTTTG
 A C G T A C G T A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T A C G T A C G T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GATGTATACT---
-ATGCATAATTCA
 A C T G G C T A C G A T C T A G C G A T C G T A A C G T C T G A G T A C A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A