Information for 19-TTAGGCWTYTWKCTAA (Motif 29)

G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A
Reverse Opposite:
C G A T A C G T C T G A A T C G T G C A C G A T C T G A C T G A C G T A C G A T C T A G A T G C G T A C C G A T G T C A C G T A
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.624
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif312.2
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets58.5 +/- 27.0bp
Average Position of motif in Background50.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TTAGGCWTYTWKCTAA
CTTGGCANNNTGCCAA
 G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTAGGCWTYTWKCTAA---
-----NNTTTTTCTTATNT
 G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTAGGCWTYTWKCTAA
-TTGGCATGGTGCCA-
 G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTAGGCWTYTWKCTAA
---ANCGTTTANN---
 G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TTAGGCWTYTWKCTAA
--TGGCAGNCTGCCAG
 G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGCWTYTWKCTAA
TNNATTATGCATANNTT---
 A C G T A C G T A C G T A C G T G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TTAGGCWTYTWKCTAA
-CAAGCTT--------
 G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TTAGGCWTYTWKCTAA
--AACCTTATAT----
 G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A
A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TTAGGCWTYTWKCTAA
---NNCAATTANN---
 G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A
A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TTAGGCWTYTWKCTAA-
ANNNGGATATATCCNNN
 G C A T C A G T C G T A C A T G A T C G A G T C C G T A A C G T G A C T A G C T C G T A A C G T A T G C G A C T G T C A G C T A A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T