Information for 12-WGCTCATTAT (Motif 27)

C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T
Reverse Opposite:
C G T A G C A T C G T A T G C A C G A T A T C G C G T A A C T G G T A C C G A T
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.758
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.09%
Number of Background Sequences with motif470.7
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets47.9 +/- 25.4bp
Average Position of motif in Background49.8 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:WGCTCATTAT
AGCTCATTAT
 C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---WGCTCATTAT----
NNNACCTCATTATCNTN
 A C G T A C G T A C G T C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---WGCTCATTAT----
GCAACCTCATTATNNNN
 A C G T A C G T A C G T C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------WGCTCATTAT
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:WGCTCATTAT
NGCTN-----
 C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:WGCTCATTAT
--CTAATTAA
 C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T
A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:WGCTCATTAT
-NCTAATTA-
 C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T
A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T

NOTO/MA0710.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:WGCTCATTAT-
-GCTAATTAGC
 C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T A C G T
A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

MEOX1/MA0661.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:WGCTCATTAT-
-GCTAATTAAC
 C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T A C G T
A C G T T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C

LHX2/MA0700.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WGCTCATTAT-
-ACTAATTAAC
 C G T A C A T G A G T C A C G T A T G C C G T A A C G T C G A T C G T A C G A T A C G T
A C G T T C G A A G T C G A C T G T C A C T G A A C G T A C G T C T G A C T G A A T G C