Information for 2-TTASTTCATGCAATTW (Motif 2)

A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A
Reverse Opposite:
C G A T C G T A C G T A A C G T A C G T A C T G A G T C G T C A A C G T C A T G C T G A C G T A A T C G C G A T C G T A C G T A
p-value:1e-14
log p-value:-3.388e+01
Information Content per bp:1.767
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.1 +/- 27.0bp
Average Position of motif in Background45.2 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTASTTCATGCAATTW
TTATTAGTACATAN-----
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A A C G T A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTASTTCATGCAATTW
-NANTTCATTGAATTA
 A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A
A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTASTTCATGCAATTW--
-NNNTCCATCCCATAANN
 A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A A C G T A C G T
A C G T A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Phox2b/MA0681.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TTASTTCATGCAATTW
-----TAATTTAATTA
 A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PH0153.1_Prop1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTASTTCATGCAATTW
GNNTNTTAATTAATNCN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G A C G T A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TTASTTCATGCAATTW
-----TAATTTAATTA
 A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTASTTCATGCAATTW
NNCATTCATTCATNNN
 A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

ATF4/MA0833.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTASTTCATGCAATTW
TATTGCATCATCC-----
 A C G T A C G T A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTASTTCATGCAATTW
-ATTTGCATACAATGG
 A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTASTTCATGCAATTW
ATTGCATCAT-------
 A C G T A C G T A C G T C G T A A T G C A C G T G A C T G T A C C G T A A C G T T C A G A G T C G T C A C G T A C G A T G A C T G C T A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T