Information for 8-AGAGAATAATGAT (Motif 15)

C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T
Reverse Opposite:
G C T A C A G T A T G C G T C A C G A T A C G T T G C A G C A T G A C T A G T C G C A T A G T C G A C T
p-value:1e-10
log p-value:-2.393e+01
Information Content per bp:1.630
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif6.30%
Number of Background Sequences with motif869.1
Percentage of Background Sequences with motif1.84%
Average Position of motif in Targets53.8 +/- 23.0bp
Average Position of motif in Background50.1 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAATAATGAT
NTTNAGAACAATTA-
 A C G T A C G T C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAATAATGAT-
NNTNANAACAATTNNA
 A C G T A C G T C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0070.1_Sox30_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGAGAATAATGAT---
AATGAACAATGGAATT
 C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGAGAATAATGAT-----
-AAACATAATGAGGTTGC
 C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAGAATAATGAT--
TTTAGAACAATAAAAT
 A C G T C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAGAATAATGAT-----
-GACGATAATGAGCTTGC
 C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGAGAATAATGAT--
NNNTAACAATTATAN
 C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAGAATAATGAT--
TTAAGAACAATAAATT
 A C G T C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGAGAATAATGAT
--AAAACAATGG-
 C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAATAATGAT---
TNNAGAACAATANATNN
 A C G T C T G A T C A G C G T A C T A G C T G A C G T A A C G T T G C A G C T A C A G T A T C G G T C A C G A T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C