Information for 22-AACACTCGTTTCT (Motif 47)

C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C G T A C G T
p-value:1e-6
log p-value:-1.428e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 15.1bp
Average Position of motif in Background75.8 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AACACTCGTTTCT
-ACTTTCGTTTCT
 C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

MYF6/MA0667.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AACACTCGTTTCT
AACAGCTGTT---
 C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T
T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AACACTCGTTTCT---
AAAACATCGTTTTTAAG
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AACACTCGTTTCT-
GAACADWATGTTCTT
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

CLOCK/MA0819.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AACACTCGTTTCT
AACACGTGTT---
 C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AACACTCGTTTCT
NNAATTCTCGNTNAN
 A C G T A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AACACTCGTTTCT--
-NNGCACCTTTCTCC
 C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

GRHL1/MA0647.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AACACTCGTTTCT
AAAACCGGTTTT-
 C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AACACTCGTTTCT-
ANCCACCTGTTGCNC
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AACACTCGTTTCT
NAACAAT-------
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T