Information for 14-GGAGGTTAGT (Motif 43)

A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T
Reverse Opposite:
C G T A A G T C C G A T C G T A C G T A A T G C A G T C A C G T A G T C A G T C
p-value:1e-6
log p-value:-1.574e+01
Information Content per bp:1.874
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif84.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets30.2 +/- 21.4bp
Average Position of motif in Background47.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGAGGTTAGT
AAGAGGATTAG-
 A C G T A C G T A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGTTAGT
CGGAGC-----
 A C G T A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGAGGTTAGT--
-CAGGTAAGTAT
 A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGAGGTTAGT
-AAGCTTG--
 A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGAGGTTAGT----
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAGGTTAGT
GGCVGTTR--
 A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GGAGGTTAGT
TTAAGAGGAAGTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGAGGTTAGT----
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGAGGTTAGT--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGTTAGT
NGAAGC-----
 A C G T A C T G C T A G C G T A A C T G A T C G A C G T A C G T C G T A C T A G A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T