Information for 14-GGTTCTCTTTCTVCAG (Motif 30)

C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G C G T A C T A G C T G A C T G A C G T A A T C G C G T A A T C G C G T A C G T A A G T C G T A C
p-value:1e-10
log p-value:-2.327e+01
Information Content per bp:1.792
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 25.8bp
Average Position of motif in Background62.4 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTTCTCTTTCTVCAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGTTCTCTTTCTVCAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GGTTCTCTTTCTVCAG
AGTTTCAGTTTC-----
 A C G T C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCTCTTTCTVCAG--
NTGACTCANTTTTTCCANTN
 A C G T A C G T C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.49
Offset:8
Orientation:forward strand
Alignment:GGTTCTCTTTCTVCAG
--------TTTTCCA-
 C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GGTTCTCTTTCTVCAG----
---NSTGTTTRCWCAGBNNN
 C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GGTTCTCTTTCTVCAG
NNGTANTGTTTTNC---
 A C G T C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GGTTCTCTTTCTVCAG
ACTTTCACTTTC-----
 A C G T C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GGTTCTCTTTCTVCAG------
-----TCNCTTTACAGCGNNNT
 C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.48
Offset:11
Orientation:reverse strand
Alignment:GGTTCTCTTTCTVCAG-
-----------CACAGN
 C A T G C T A G C G A T A C G T A T G C A C G T A T G C A C G T A G C T A G C T A G T C A C G T T A G C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C