Information for 1-ATGCRCATAT (Motif 3)

T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T
Reverse Opposite:
T G C A G C A T C T G A A C G T T A C G A G T C T C A G G A T C T G C A A G C T
p-value:1e-15
log p-value:-3.487e+01
Information Content per bp:1.648
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif9.97%
Number of Background Sequences with motif1514.3
Percentage of Background Sequences with motif3.33%
Average Position of motif in Targets55.2 +/- 24.7bp
Average Position of motif in Background48.2 +/- 39.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATGCRCATAT
ATTTGCATA-
 T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATGCRCATAT
ATTTGCATA-
 T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATGCRCATAT
TAATTTGCATAA
 A C G T A C G T T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ATGCRCATAT
TTCATTTGCATAT
 A C G T A C G T A C G T T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATGCRCATAT-
AATTTGCATANT
 A C G T T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATGCRCATAT
ATTTGCATAA
 T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATGCRCATAT
ATTTGCATAT
 T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATGCRCATAT
BTVATTWGCATA-
 A C G T A C G T A C G T T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----ATGCRCATAT--
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C G T T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATGCRCATAT--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T T C G A A C G T C T A G A G T C T C A G A T G C G T C A A G C T C G T A A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A