Information for 1-RAGGGAGDGGNAR (Motif 1)

T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G
Reverse Opposite:
G A T C G A C T A T C G G T A C A G T C G C A T A G T C G C A T A T G C A G T C A G T C G C A T A G C T
p-value:1e-16
log p-value:-3.789e+01
Information Content per bp:1.600
Number of Target Sequences with motif130.0
Percentage of Target Sequences with motif18.26%
Number of Background Sequences with motif3794.3
Percentage of Background Sequences with motif8.35%
Average Position of motif in Targets47.2 +/- 26.2bp
Average Position of motif in Background50.2 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:RAGGGAGDGGNAR
-GGGGNGGGGC--
 T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:RAGGGAGDGGNAR
-TGGGTGGGGC--
 T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G
A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.81
Offset:1
Orientation:forward strand
Alignment:RAGGGAGDGGNAR
-DGGGYGKGGC--
 T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G
A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:RAGGGAGDGGNAR
-TGGGTGTGGCN-
 T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G
A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--RAGGGAGDGGNAR
NNVDGGGYGGGGCYN
 A C G T A C G T T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.77
Offset:0
Orientation:forward strand
Alignment:RAGGGAGDGGNAR
NTGGGTGTGGCC-
 T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.77
Offset:2
Orientation:forward strand
Alignment:RAGGGAGDGGNAR
--GGGGGGGG---
 T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G
A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:RAGGGAGDGGNAR
GGGGGCGTGGN--
 T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G
C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:RAGGGAGDGGNAR
-TGGGTGTGGC--
 T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--RAGGGAGDGGNAR-
NNAGGGGCGGGGTNNA
 A C G T A C G T T C G A C G T A C T A G A C T G T A C G C G T A C T A G C G T A C T A G A C T G T A G C C T G A C T A G A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A