Information for 13-AAGTACTGAT (Motif 41)

G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T
Reverse Opposite:
C G T A C G A T T A G C T C G A A C T G A C G T G T C A A G T C G C A T C G A T
p-value:1e-5
log p-value:-1.219e+01
Information Content per bp:1.701
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.3 +/- 5.2bp
Average Position of motif in Background81.8 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAGTACTGAT---
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A C G T G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAGTACTGAT--
TTATGTACTAATAA
 A C G T A C G T G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAGTACTGAT--
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AAGTACTGAT--
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C G T G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AAGTACTGAT--
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGTACTGAT
AAGCACTTAA
 G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PH0061.1_Hoxb6/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AAGTACTGAT-
NNNGTAATTACNNATA
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGTACTGAT--
--NTATYGATCH
 G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T A C G T A C G T
A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

PH0008.1_Barx2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAGTACTGAT-
TAAGTAATTAGTTATA
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T A C G T
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGTACTGAT----
NNGTANTGTTTTNC
 G C T A C G T A C T A G C A G T C G T A G T A C A C G T A T C G G C T A A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C