Information for 17-YGCTGGTCMCGCC (Motif 35)

A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C A C T G A C G T A C T G T C G A G T A C A G T C C G T A A C T G A G T C T C G A
p-value:1e-7
log p-value:-1.703e+01
Information Content per bp:1.910
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 4.9bp
Average Position of motif in Background50.0 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:YGCTGGTCMCGCC-
----GGTCCCGCCC
 A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:YGCTGGTCMCGCC----
--NNGGCCACGCCTTTN
 A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:YGCTGGTCMCGCC--
---CNGTCACGCCAC
 A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:YGCTGGTCMCGCC---
----GGCCCCGCCCCC
 A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:YGCTGGTCMCGCC-
--VDTTTCCCGCCA
 A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C A C G T
A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:YGCTGGTCMCGCC--
-----TTCCCGCCWG
 A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:YGCTGGTCMCGCC---
----GGCCACRCCCMK
 A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

KLF14/MA0740.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:YGCTGGTCMCGCC-----
----GGCCACGCCCCCTT
 A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:YGCTGGTCMCGCC-
---NNTTCCCGCCC
 A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C A C G T
A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:YGCTGGTCMCGCC-------
-----GCCCCGCCCCCTCCC
 A G C T A C T G A G T C A C G T A C T G A C T G A C G T A G T C G T C A A G T C C T A G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C