Information for 18-TGTBTTGTTGBTAADG (Motif 28)

A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G
Reverse Opposite:
G T A C G A C T A G C T A G C T C G T A T A C G A G T C C G T A C T G A G T A C C G T A C G T A T A C G C T G A G T A C C G T A
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.795
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.8 +/- 9.0bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0054.1_Rfx3_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTBTTGTTGBTAADG------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTBTTGTTGBTAADG
NNNTGTTGTTGTTNG--
 A C G T A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTBTTGTTGBTAADG
-GTNTTGTTGTGANNT
 A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G
A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGTBTTGTTGBTAADG
----CTGTTGCTAGGS
 A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGTBTTGTTGBTAADG--
---NNCGTTGCTATGGNN
 A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTBTTGTTGBTAADG
NNNTCCTTTGTTCTNNN--
 A C G T A C G T A C G T A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTBTTGTTGBTAADG
-TAATTGTTCTAAAC-
 A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G
A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGTBTTGTTGBTAADG
TTCAATTGTTCTAAAA-
 A C G T A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGTBTTGTTGBTAADG
TNNTCCTTTGTTCTNNT--
 A C G T A C G T A C G T A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTBTTGTTGBTAADG
---ATTGTT-------
 A C G T A C T G A G C T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A G T C C G A T C T G A C T G A C G T A A C T G
A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T