Information for 16-GRACWMRGARAKGSAW (Motif 24)

A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A
Reverse Opposite:
C G A T A C G T A T C G A G T C G T C A A C G T A G T C A C G T G T A C A G C T A C T G C G T A A C T G A G C T A G C T A G T C
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.806
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.2 +/- 14.6bp
Average Position of motif in Background61.5 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GRACWMRGARAKGSAW
GGAACAAAGR-------
 A C G T A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GRACWMRGARAKGSAW-
-----CGGAAGTGAAAC
 A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GRACWMRGARAKGSAW-
CTACTTGGATACGGAAT
 A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GRACWMRGARAKGSAW
AGAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GRACWMRGARAKGSAW
VRRACAAWGG-------
 A C G T A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GRACWMRGARAKGSAW
ATAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GRACWMRGARAKGSAW--
------AGAAACGAAAGT
 A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.48
Offset:6
Orientation:forward strand
Alignment:GRACWMRGARAKGSAW--
------GGAAGTGAAAST
 A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GRACWMRGARAKGSAW
--ACAAAG--------
 A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:GRACWMRGARAKGSAW-----
--------ATATGCAAATNNN
 A C T G T C G A C T G A A G T C C G A T G T A C C T G A A C T G C G T A C T A G C G T A A C G T A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A