Information for 9-TGGWGMMTTMRCS (Motif 17)

A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C
Reverse Opposite:
T A C G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A G T C C G T A A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.802
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.6 +/- 30.7bp
Average Position of motif in Background25.0 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0015.1_Crx/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGWGMMTTMRCS-
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGWGMMTTMRCS
TGCTGASTCAGC-
 A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T

MAFF/MA0495.1/Jaspar

Match Rank:3
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TGGWGMMTTMRCS
NAAAANTGCTGACTCAGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGGWGMMTTMRCS
GTGGAT--------
 A C G T A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGGWGMMTTMRCS
NGGGGATTTCCC-
 A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGGWGMMTTMRCS---
AGGGGGATTAGCTGCC
 A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGGWGMMTTMRCS--
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

MAFG/MA0659.1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGGWGMMTTMRCS----
AAATTGCTGAGTCAGCATATT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C A C G T A C G T A C G T A C G T
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGGWGMMTTMRCS
GRTGMTRGAGCC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGGWGMMTTMRCS
AAATTTGCTGACTTAGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G A T C T A G G T C A T G A C A C G T A C G T G T C A T C A G A G T C A T G C
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C A C G T