Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-61 | -1.423e+02 | 0.0000 | 286.0 | 36.86% | 5780.5 | 13.12% | motif file (matrix) |
svg |
2 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-61 | -1.417e+02 | 0.0000 | 268.0 | 34.54% | 5143.3 | 11.67% | motif file (matrix) |
svg |
3 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-47 | -1.088e+02 | 0.0000 | 147.0 | 18.94% | 2024.0 | 4.59% | motif file (matrix) |
svg |
4 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-45 | -1.046e+02 | 0.0000 | 145.0 | 18.69% | 2043.2 | 4.64% | motif file (matrix) |
svg |
5 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-43 | -9.928e+01 | 0.0000 | 111.0 | 14.30% | 1247.5 | 2.83% | motif file (matrix) |
svg |
6 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-41 | -9.662e+01 | 0.0000 | 99.0 | 12.76% | 1005.8 | 2.28% | motif file (matrix) |
svg |
7 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-41 | -9.554e+01 | 0.0000 | 92.0 | 11.86% | 866.3 | 1.97% | motif file (matrix) |
svg |
8 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-41 | -9.484e+01 | 0.0000 | 86.0 | 11.08% | 750.1 | 1.70% | motif file (matrix) |
svg |
9 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-40 | -9.329e+01 | 0.0000 | 100.0 | 12.89% | 1069.8 | 2.43% | motif file (matrix) |
svg |
10 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-38 | -8.887e+01 | 0.0000 | 114.0 | 14.69% | 1476.5 | 3.35% | motif file (matrix) |
svg |
11 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-37 | -8.743e+01 | 0.0000 | 172.0 | 22.16% | 3244.6 | 7.36% | motif file (matrix) |
svg |
12 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-37 | -8.731e+01 | 0.0000 | 88.0 | 11.34% | 874.5 | 1.99% | motif file (matrix) |
svg |
13 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-37 | -8.677e+01 | 0.0000 | 50.0 | 6.44% | 216.5 | 0.49% | motif file (matrix) |
svg |
14 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-34 | -8.007e+01 | 0.0000 | 66.0 | 8.51% | 506.3 | 1.15% | motif file (matrix) |
svg |
15 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-31 | -7.238e+01 | 0.0000 | 51.0 | 6.57% | 311.3 | 0.71% | motif file (matrix) |
svg |
16 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-31 | -7.161e+01 | 0.0000 | 109.0 | 14.05% | 1648.6 | 3.74% | motif file (matrix) |
svg |
17 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-27 | -6.281e+01 | 0.0000 | 87.0 | 11.21% | 1204.4 | 2.73% | motif file (matrix) |
svg |
18 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-25 | -5.867e+01 | 0.0000 | 49.0 | 6.31% | 384.8 | 0.87% | motif file (matrix) |
svg |
19 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-22 | -5.245e+01 | 0.0000 | 85.0 | 10.95% | 1349.3 | 3.06% | motif file (matrix) |
svg |
20 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-17 | -4.139e+01 | 0.0000 | 56.0 | 7.22% | 760.6 | 1.73% | motif file (matrix) |
svg |
21 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-16 | -3.845e+01 | 0.0000 | 100.0 | 12.89% | 2216.0 | 5.03% | motif file (matrix) |
svg |
22 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.520e+01 | 0.0000 | 54.0 | 6.96% | 822.7 | 1.87% | motif file (matrix) |
svg |
23 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-12 | -2.844e+01 | 0.0000 | 30.0 | 3.87% | 322.3 | 0.73% | motif file (matrix) |
svg |
24 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-8 | -1.893e+01 | 0.0000 | 104.0 | 13.40% | 3277.8 | 7.44% | motif file (matrix) |
svg |
25 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-6 | -1.559e+01 | 0.0000 | 22.0 | 2.84% | 327.4 | 0.74% | motif file (matrix) |
svg |
26 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.333e+01 | 0.0000 | 186.0 | 23.97% | 7627.7 | 17.31% | motif file (matrix) |
svg |
27 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-5 | -1.289e+01 | 0.0000 | 9.0 | 1.16% | 63.5 | 0.14% | motif file (matrix) |
svg |
28 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.226e+01 | 0.0001 | 10.0 | 1.29% | 88.0 | 0.20% | motif file (matrix) |
svg |
29 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-5 | -1.159e+01 | 0.0001 | 137.0 | 17.65% | 5411.1 | 12.28% | motif file (matrix) |
svg |
30 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-4 | -1.028e+01 | 0.0004 | 57.0 | 7.35% | 1831.5 | 4.16% | motif file (matrix) |
svg |
31 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.024e+01 | 0.0004 | 8.0 | 1.03% | 68.2 | 0.15% | motif file (matrix) |
svg |
32 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-4 | -1.004e+01 | 0.0005 | 114.0 | 14.69% | 4468.9 | 10.14% | motif file (matrix) |
svg |
33 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-4 | -1.002e+01 | 0.0005 | 60.0 | 7.73% | 1979.9 | 4.49% | motif file (matrix) |
svg |
34 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-4 | -9.808e+00 | 0.0006 | 77.0 | 9.92% | 2754.8 | 6.25% | motif file (matrix) |
svg |
35 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-4 | -9.411e+00 | 0.0009 | 98.0 | 12.63% | 3770.2 | 8.56% | motif file (matrix) |
svg |
36 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-4 | -9.313e+00 | 0.0009 | 23.0 | 2.96% | 526.8 | 1.20% | motif file (matrix) |
svg |
37 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.627e+00 | 0.0018 | 61.0 | 7.86% | 2130.2 | 4.84% | motif file (matrix) |
svg |
38 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-3 | -8.429e+00 | 0.0021 | 71.0 | 9.15% | 2602.4 | 5.91% | motif file (matrix) |
svg |
39 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -8.387e+00 | 0.0021 | 56.0 | 7.22% | 1926.7 | 4.37% | motif file (matrix) |
svg |
40 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.246e+00 | 0.0024 | 27.0 | 3.48% | 718.6 | 1.63% | motif file (matrix) |
svg |
41 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-3 | -7.691e+00 | 0.0041 | 14.0 | 1.80% | 273.7 | 0.62% | motif file (matrix) |
svg |
42 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-3 | -7.556e+00 | 0.0045 | 18.0 | 2.32% | 413.8 | 0.94% | motif file (matrix) |
svg |
43 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-3 | -7.081e+00 | 0.0071 | 57.0 | 7.35% | 2082.5 | 4.73% | motif file (matrix) |
svg |
44 |
| E-box(bHLH)/Promoter/Homer | 1e-3 | -6.910e+00 | 0.0083 | 11.0 | 1.42% | 199.1 | 0.45% | motif file (matrix) |
svg |
45 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-2 | -6.616e+00 | 0.0108 | 41.0 | 5.28% | 1400.2 | 3.18% | motif file (matrix) |
svg |
46 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -6.582e+00 | 0.0110 | 15.0 | 1.93% | 342.1 | 0.78% | motif file (matrix) |
svg |
47 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-2 | -6.389e+00 | 0.0130 | 15.0 | 1.93% | 350.0 | 0.79% | motif file (matrix) |
svg |
48 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.353e+00 | 0.0132 | 43.0 | 5.54% | 1510.3 | 3.43% | motif file (matrix) |
svg |
49 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -6.213e+00 | 0.0149 | 60.0 | 7.73% | 2306.9 | 5.24% | motif file (matrix) |
svg |
50 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -6.161e+00 | 0.0154 | 39.0 | 5.03% | 1347.8 | 3.06% | motif file (matrix) |
svg |
51 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -5.758e+00 | 0.0225 | 9.0 | 1.16% | 166.6 | 0.38% | motif file (matrix) |
svg |
52 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -5.477e+00 | 0.0293 | 3.0 | 0.39% | 18.4 | 0.04% | motif file (matrix) |
svg |
53 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.442e+00 | 0.0297 | 89.0 | 11.47% | 3813.6 | 8.66% | motif file (matrix) |
svg |
54 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -5.409e+00 | 0.0302 | 49.0 | 6.31% | 1872.1 | 4.25% | motif file (matrix) |
svg |
55 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.246e+00 | 0.0349 | 33.0 | 4.25% | 1153.0 | 2.62% | motif file (matrix) |
svg |
56 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.172e+00 | 0.0369 | 69.0 | 8.89% | 2860.8 | 6.49% | motif file (matrix) |
svg |
57 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-2 | -4.864e+00 | 0.0493 | 10.0 | 1.29% | 227.0 | 0.52% | motif file (matrix) |
svg |
58 |
| CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -4.780e+00 | 0.0527 | 9.0 | 1.16% | 194.3 | 0.44% | motif file (matrix) |
svg |
59 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -4.772e+00 | 0.0527 | 25.0 | 3.22% | 836.9 | 1.90% | motif file (matrix) |
svg |