Information for 4-GCTVTTTCATAAA (Motif 6)

A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T C G T A C G A T C T A G C G T A C T G A C G T A A G T C C G T A C T A G G T A C
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.867
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 29.6bp
Average Position of motif in Background56.5 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCTVTTTCATAAA-
NNTTTTTCTTATNT
 A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCTVTTTCATAAA
---VTTRCATAAY
 A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A
A C G T A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

NFIL3/MA0025.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTVTTTCATAAA
-ANGTTACATAA-
 A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A
A C G T C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCTVTTTCATAAA
---ATTGCATAA-
 A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A
A C G T A C G T A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTVTTTCATAAA---
--TCTTTANTAATANN
 A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

HLF/MA0043.2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTVTTTCATAAA-
--NGTTACGTAANN
 A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A A C G T
A C G T A C G T C A T G T C A G G C A T C A G T C T G A A G T C T C A G G A C T T G C A C G T A A G C T C T A G

DBP/MA0639.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTVTTTCATAAA-
--NGTTACGTAATN
 A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A A C G T
A C G T A C G T A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTVTTTCATAAA
CAGCTGTTTCCT---
 A C G T A C G T A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T

TEF/MA0843.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTVTTTCATAAA-
--TATTACGTAACA
 A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A A C G T
A C G T A C G T A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTVTTTCATAAA
KCTATTTTTRGH-
 A C T G A G T C A C G T T C A G A C G T A G C T A C G T A G T C C G T A A C G T C G T A C G T A C T G A
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T