Information for 13-AGGCGAAGCCTGG (Motif 21)

C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C A C G T
p-value:1e-7
log p-value:-1.660e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 19.6bp
Average Position of motif in Background54.7 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGCGAAGCCTGG
GGGGCCGAGGCCTG-
 A C G T A C G T C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGCGAAGCCTGG
CAAAGGCGTGGCCAG-
 A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGGCGAAGCCTGG
---NGAAGC----
 C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGGCGAAGCCTGG
-----AGGCCTNG
 C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGGCGAAGCCTGG
-----AAGCTTG-
 C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGCGAAGCCTGG
RGKGGGCGGAGC----
 A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGGCGAAGCCTGG
-----AGGCCTAG
 C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGGCGAAGCCTGG--
NNGGCGACACCTCNNN
 A C G T C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGGCGAAGCCTGG
GGGGGCGGGGCC---
 A C G T A C G T C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGGCGAAGCCTGG
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T